Electronic Journal of Plant Breeding
Open Access
SCOPUS
  • Year: 2011
  • Volume: 2
  • Issue: 1

Marker Assisted Selection for Leaf Blast Disease resistance and other yield traits in rice (Oryza sativa L.) using RAPD Markers

  • Author:
  • Selvaraj C Immanuel1,2,, Pothiraj Nagarajan1, K. Thiyagarajan3, M Bharathi4, R Rabindran4
  • Total Page Count: 16
  • Page Number: 8 to 23

1Centre for Plant Molecular Biology, Tamil Nadu Agricultural University, Coimbatore, India

2 Current Address: School of Biosciences and Technology, Vellore Institute of Technology University, Vellore

3Centre for Plant Breeding and Genetics, Tamil Nadu Agricultural University, Coimbatore, India

4Centre for Plant Protection Studies, Tamil Nadu Agricultural University, Coimbatore, India

* Email: immmer@gmail.com

Online published on 12 April, 2012.

Abstract

A segregating population of 220 F2 individuals was developed by raising the selfed F1 seeds of a single hybrid plant, White Ponni x Moroberekan. Two hundred and twenty F3 families were phenotyped for blast resistance under artificial condition. Bulk-segregant analysis resulted in the identification of 12 leaf blast resistant phenotype specific RAPD markers. Mapping survey was done with seven RAPD primers which co-segregated in BSA. Twelve RAPD markers were scored in the F2 mapping population. Out of 12 marker loci, 11 marker loci (91.97 per cent) fitted into the expected segregation ratio of 3:1 based on x2- test at 0.05 per cent probability value. One way ANOVA was performed to identify the marker phenotype association and this resulted in the identification of seven RAPD markers linked to three traits viz., leaf blast resistance (OPBB 5258 OPBB 5194, OPAL 16940 and OPBD 12680), five markers for GPT and one marker for grain yield per plant.

Keywords

Bulked-segregant Analysis, Single-marker Analysis, Magnaporthe grisea (Hebert) Barr, Moroberekan, Grain yield, Glume Purple Tip